PAMAM Dendrimer (Polyamidoamines)

Jmol.jmolButton(jmolApplet0, 'load ../polymer/model/dendrimerTest2.pdb; spacefill off; connect aromatic auto; hide all; hide none; hide 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28; set echo top centre; echo Core; delay 1; hide none; hide 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27; echo; echo Branching Units; delay 1; hide none; hide 1,2,3,4,5,6,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27; delay 1; hide none; hide 1,2,3,4,5,6,8,9,10,11,12,13,15,16,17,18,19,20,21,22,23,24,25,26,27; delay 1; hide none; hide 1,2,3,4,5,6,8,9,10,11,12,13,15,16,17,18,19,20,22,23,24,25,26,27; delay 0.7; hide none; hide 1,2,3,4,5,6,8,9,10,11,12,13,15,16,17,18,19,20,22,23,24,25,26,27; delay 0.7;hide none; hide 1,2,3,4,5,6,8,9,10,11,12,13,15,16,17,18,19,20,22,23,24,25,26; delay 0.7; hide none; hide 1,2,3,4,5,6,8,9,10,11,12,13,15,16,17,18,19,20,22,23,25,26; delay 0.7; hide none; hide 1,2,3,4,5,8,9,10,11,12,13,15,16,17,18,19,20,22,23,25,26; delay 0.7; hide none; hide 1,2,4,5,8,9,10,11,12,13,15,16,17,18,19,20,22,23,25,26; delay 0.7; hide none; hide 1,2,4,5,8,9,11,12,13,15,16,17,18,19,20,22,23,25,26; delay 1; hide none; hide 1,2,4,5,8,9,11,12,15,16,17,18,19,20,22,23,25,26; delay 0.7; hide none; hide none; hide 1,2,4,5,8,9,11,12,15,16,18,19,20,22,23,25,26; delay 0.7; hide none; hide 1,2,4,5,8,9,11,12,15,16,18,19,22,23,25,26; delay 0.7; hide none ;hide 1,2,4,5,8,9,11,12,15,16,18,19,22,23,25; echo; echo Terminal Groups; delay 0.5; hide none; hide 1,2,4,5,8,9,11,12,15,16,18,19,22,23; delay 0.5; hide none; hide 1,2,4,5,8,9,11,12,15,16,18,19,22; delay 0.5; hide none; hide 1,2,4,5,8,9,11,12,15,16,18,19; delay 0.5; hide none; hide 1,2,4,8,9,11,12,15,16,18,19; delay 0.5; hide none; hide 1,2,8,9,11,12,15,16,18,19; delay 0.5; hide none; hide 1,8,9,11,12,15,16,18,19; delay 0.5; hide none; hide 8,9,11,12,15,16,18,19; delay 0.5; hide none; hide 9,11,12,15,16,18,19; delay 0.5; hide none; hide 11,12,15,16,18,19; delay 0.5; hide none; hide 12,15,16,18,19; delay 0.5 ;hide none; hide 15,16,18,19; delay 0.5 ; hide none; hide 15,18,19; delay 0.5; hide none; hide 18,19; delay 0.5; hide none; hide 19; delay 0.5; hide none; delay 1; spin y 70; delay 5.3; spin off' , "Grow Dendrimer") Jmol.jmolButton(jmolApplet0, 'load ../polymer/model/dendrimerTest2.pdb; connect aromatic auto; boundbox off; set showunitcell false; set showaxes false; set showhydrogens false; spacefill 50; wireframe 50; spin off; selectionhalos on; select 29; echo; set echo top centre; echo Core; delay 1.5; colour blue; select 28,7,14,21; echo; set echo top centre; echo Branching Units; delay 1.5; colour mediumslateblue; select 6,3,27,24,17,20,13,10; colour deeppink; delay 1.5; select 26,25,23,22,5,4,2,1,8,9,11,12,15,16,18,19; colour dodgerblue; echo; set echo top centre; echo Terminal Groups; delay 1.5; colour mediumblue; selectionhalos off; echo; set echo top centre; echo PAMAM dendrimer;spin y 70; delay 5.3; spin off; select all', "Show Layers") Jmol.jmolButton(jmolApplet0, 'load ../polymer/model/dendrimerTest2.pdb; connect aromatic auto; hover off; set hoverCallback "jmolscript: script ../polymer/script/hoverPA.spt"; echo; set echo top centre; echo PAMAM Dendrimer; boundbox off; set showunitcell false; set showaxes false; set showhydrogens false; spacefill 50; wireframe 50; select 29; colour peachpuff; select 28; colour palegreen; select 27,24; colour paleturquoise; select 26,25,23,22; colour lightseagreen; select 7; colour orchid; select 6,3; colour mediumvioletred; select 5,4,2,1; colour darkviolet; select 14; colour dodgerblue; select 10,13; colour mediumslateblue; select 12,11,9,8; colour mediumblue; select 21; colour yellowtint; select 17,20; colour peru; select 16,15,18,19; colour goldenrod; spin y 70; delay 5.3; spin off; select all', "Show Individual Repeating Block Sections*") Jmol.jmolButton(jmolApplet0, 'load ../polymer/model/dendrimerTest2.pdb; connect aromatic auto; boundbox off; set showunitcell false; set showaxes false; set showhydrogens false; select 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,29,30,50; colour grey; colour translucent; wireframe on; spacefill off; select 28; centre selected; moveto 2.0 { 115 -285 952 108.75} 300.0 0.0 0.0 {-3.6891766 -5.9934707 -0.061999988} 30.162895 {0.0 0.0 0.0} -33.63915 -9.17173 50.0; set showhydrogens true; delay 2; set echo top centre; echo Branched repeating unit; select all', "Show Single Repeating Unit") Jmol.jmolButton(jmolApplet0, 'load ../polymer/model/dendrimerTest2.pdb; connect aromatic auto; hover off; set hoverCallback "jmolscript: script ../polymer/script/hoverPA.spt"; echo; set echo top centre; echo PAMAM Dendrimer; boundbox off; set showunitcell false; set showaxes false; set showhydrogens false; spacefill on; isosurface on; select 29; colour peachpuff; select 28; colour palegreen; select 27,24; colour paleturquoise; select 26,25,23,22; colour lightseagreen; select 7; colour orchid; select 6,3; colour mediumvioletred; select 5,4,2,1; colour darkviolet; select 14; colour dodgerblue; select 10,13; colour mediumslateblue; select 12,11,9,8; colour mediumblue; select 21; colour yellowtint; select 17,20; colour peru; select 16,15,18,19; colour goldenrod; spin y 70; delay 5.3; spin off; select all', "Show Spacefilled Repeating units*") Jmol.jmolButton(jmolApplet0, 'load ../polymer/model/dendrimer2.pdb; set echo top centre; echo PAMAM Dendrimer; boundbox off; set showunitcell false; set showaxes false; set showhydrogens false; spacefill 50; wireframe 50;connect aromatic auto;select all;', "Reset")

PAMAM

Polyamidoamines are synthesised from a diamine and unsaturated ester methacrylate.

Hover feature

* Indicates that the button contains a hover feature. Click on the JSmol window and hover over part of the molecule to see its repeating unit.

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